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    DEHA2F13948g DEHA2F13948p [ Debaryomyces hansenii CBS767 ]

    Gene ID: 2904077, updated on 17-May-2024

    Summary

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    Gene symbol
    DEHA2F13948g
    Gene description
    DEHA2F13948p
    Locus tag
    DEHA2F13948g
    See related
    FungiDB:DEHA2F13948g; VEuPathDB:DEHA2F13948g
    Gene type
    protein coding
    RNA name
    DEHA2F13948p
    RefSeq status
    PROVISIONAL
    Organism
    Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
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    Genomic context

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    See DEHA2F13948g in Genome Data Viewer
    Location:
    chromosome: F
    Exon count:
    1
    Sequence:
    Chromosome: F; NC_006048.2 (1186489..1187892, complement)

    Chromosome F - NC_006048.2Genomic Context describing neighboring genes Neighboring gene DEHA2F13904p Neighboring gene DEHA2F13926p Neighboring gene DEHA2F13970p Neighboring gene DEHA2F13992p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006048.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fumarate hydratase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fumarate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in malate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tricarboxylic acid cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of tricarboxylic acid cycle heteromeric enzyme complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DEHA2F13948p
    XP_460970.2
    • highly similar to uniprot|P08417 Saccharomyces cerevisiae YPL262W FUM1 Fumarase converts fumaric acid to L-malic acid in the TCA cycle

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006048.2 Reference assembly

      Range
      1186489..1187892 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_460970.1 → XP_460970.2  DEHA2F13948p [Debaryomyces hansenii CBS767]

      See identical proteins and their annotated locations for XP_460970.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q6BLF1
      Conserved Domains (2) summary
      cd01362
      Location:9 → 463
      Fumarase_classII; Class II fumarases
      PRK00485
      Location:9 → 467
      fumC; fumarate hydratase; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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