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    COX2 cytochrome c oxidase subunit II [ Shinisaurus crocodilurus ]

    Gene ID: 2866180, updated on 27-Aug-2016

    Summary

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    Gene symbol
    COX2
    Gene description
    cytochrome c oxidase subunit II
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Shinisaurus crocodilurus (common: crocodile lizard, specimen-voucher: NUM-Az0370 (Nagoya University Museum))
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Scleroglossa; Anguimorpha; Shinisauridae; Shinisaurus
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    Genomic context

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    Sequence:
    Chromosome: MT; NC_005959.1 (7473..8160)

    Chromosome MT - NC_005959.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase subunit 2 Neighboring gene cytochrome c oxidase subunit I Neighboring gene ATP synthase F0 subunit 8 Neighboring gene ATP synthase F0 subunit 6 Neighboring gene cytochrome c oxidase subunit III

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_005959.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mitochondrial DNA sequences of five squamates: phylogenetic affiliation of snakes. Kumazawa Y. DNA Res, 2004 Apr 30. PMID 15449546
    2. Mitochondrial genome of the Komodo dragon: efficient sequencing method with reptile-oriented primers and novel gene rearrangements. Kumazawa Y, et al. DNA Res, 2004 Apr 30. PMID 15449544

    GeneRIFs: Gene References Into Functions

    General protein information

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    Names
    cytochrome c oxidase subunit II
    YP_044729.1
    • TAA stop codon is completed by the addition of 3' A residues to the mRNA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_005959.1 Reference assembly

      Range
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_044729.1 cytochrome c oxidase subunit II [Shinisaurus crocodilurus]

      See identical proteins and their annotated locations for YP_044729.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6I7U5
      Conserved Domains (3) summary
      MTH00117
      Location:1 → 225
      COX2; cytochrome c oxidase subunit II; Provisional
      cd13912
      Location:93 → 222
      CcO_II_C; C-terminal domain of Cytochrome c Oxidase subunit II
      pfam02790
      Location:2 → 83
      COX2_TM; Cytochrome C oxidase subunit II, transmembrane domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6I7U5.1