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    SAPIO_CDS8213 uncharacterized protein [ Scedosporium apiospermum ]

    Gene ID: 27727285, updated on 17-May-2024

    Summary

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    Gene symbol
    SAPIO_CDS8213
    Gene description
    uncharacterized protein
    Locus tag
    SAPIO_CDS8213
    See related
    FungiDB:SAPIO_CDS8213; VEuPathDB:SAPIO_CDS8213
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Scedosporium apiospermum (strain: IHEM 14462, nat-host: Homo sapiens)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Microascales; Microascaceae; Scedosporium
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    Genomic context

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    See SAPIO_CDS8213 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    5

    NW_015971822.1Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene pseudo Neighboring gene NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial Neighboring gene Ubiquitin-protein ligase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015971822.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft Genome Sequence of the Pathogenic Fungus Scedosporium apiospermum. Vandeputte P, et al. Genome Announc, 2014 Oct 2. PMID 25278533, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CCR4-NOT complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_015971822.1 Reference assembly

      Range
      515507..521912 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016789897.1 → XP_016640160.1  uncharacterized protein SAPIO_CDS8213 [Scedosporium apiospermum]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A084FZ49
      Conserved Domains (3) summary
      COG5175
      Location:9 → 392
      MOT2; Transcriptional repressor [Transcription]
      cd12438
      Location:116 → 215
      RRM_CNOT4; RNA recognition motif in Eukaryotic CCR4-NOT transcription complex subunit 4 (NOT4) and similar proteins
      pfam14570
      Location:15 → 61
      zf-RING_4; RING/Ubox like zinc-binding domain
    Nucleotide Protein
    Heading Accession and Version

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