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    SPPG_03204 uncharacterized protein [ Spizellomyces punctatus DAOM BR117 ]

    Gene ID: 27686737, updated on 17-May-2024

    Summary

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    Gene symbol
    SPPG_03204
    Gene description
    uncharacterized protein
    Locus tag
    SPPG_03204
    See related
    FungiDB:SPPG_03204; VEuPathDB:SPPG_03204
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Spizellomyces punctatus DAOM BR117 (strain: DAOM BR117)
    Lineage
    Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota; Chytridiomycota incertae sedis; Chytridiomycetes; Spizellomycetales; Spizellomycetaceae; Spizellomyces
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    Genomic context

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    See SPPG_03204 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_015971541.1Genomic Context describing neighboring genes Neighboring gene NAD(P)H:quinone oxidoreductase, type IV Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene small GTP-binding protein domain Neighboring gene uncharacterized protein Neighboring gene TATA-binding protein-associated factor TAF6 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015971541.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ribosomal large subunit binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in rescue of stalled ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosome-associated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RQC complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_015971541.1 Reference assembly

      Range
      396067..397792
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016751478.1 → XP_016609432.1  uncharacterized protein SPPG_03204, partial [Spizellomyces punctatus DAOM BR117]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L0HK31
      Conserved Domains (1) summary
      pfam11923
      Location:388 → 518
      DUF3441; Domain of unknown function (DUF3441)
    Nucleotide Protein
    Heading Accession and Version

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