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    PEX2_102770 hypothetical protein [ Penicillium expansum ]

    Gene ID: 27682967, updated on 21-Dec-2023

    Summary

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    Gene symbol
    PEX2_102770
    Gene description
    hypothetical protein
    Locus tag
    PEX2_102770
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Penicillium expansum (strain: MD-8, nat-host: apple)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium
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    Genomic context

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    See PEX2_102770 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    7

    NW_015971204.1Genomic Context describing neighboring genes Neighboring gene Zinc finger, C2H2 Neighboring gene protein of unknown function DUF2431 Neighboring gene Pseudouridine synthase II

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015971204.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome, Transcriptome, and Functional Analyses of Penicillium expansum Provide New Insights Into Secondary Metabolism and Pathogenicity. Ballester AR, et al. Mol Plant Microbe Interact, 2015 Mar. PMID 25338147
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of GID complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_015971204.1 Reference assembly

      Range
      238851..241654 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016747547.1 → XP_016602095.1  hypothetical protein PEX2_102770 [Penicillium expansum]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0A2IY98
      Conserved Domains (3) summary
      smart00668
      Location:327 → 373
      CTLH; C-terminal to LisH motif
      smart00757
      Location:382 → 472
      CRA; CT11-RanBPM
      pfam10607
      Location:322 → 467
      CLTH; CTLH/CRA C-terminal to LisH motif domain
    Nucleotide Protein
    Heading Accession and Version

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