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    PEX2_086040 NAD-dependent epimerase/dehydratase [ Penicillium expansum ]

    Gene ID: 27681294, updated on 21-Dec-2023

    Summary

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    Gene symbol
    PEX2_086040
    Gene description
    NAD-dependent epimerase/dehydratase
    Locus tag
    PEX2_086040
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Penicillium expansum (strain: MD-8, nat-host: apple)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium
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    Genomic context

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    See PEX2_086040 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_015971188.1Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Spherulation-specific family 4 Neighboring gene Ribosomal protein L37, mitochondrial Neighboring gene Glutathione S-transferase, C-terminal

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015971188.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome, Transcriptome, and Functional Analyses of Penicillium expansum Provide New Insights Into Secondary Metabolism and Pathogenicity. Ballester AR, et al. Mol Plant Microbe Interact, 2015 Mar. PMID 25338147
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-glucose 4-epimerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in galactose catabolic process via UDP-galactose IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NAD-dependent epimerase/dehydratase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_015971188.1 Reference assembly

      Range
      325220..326530
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016745874.1 → XP_016602321.1  NAD-dependent epimerase/dehydratase [Penicillium expansum]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0A2K1F8
      Conserved Domains (2) summary
      TIGR01179
      Location:57 → 424
      galE; UDP-glucose-4-epimerase GalE
      cl21454
      Location:56 → 428
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases