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    RHTO_05240 tetratricopeptide repeat containing protein [ Rhodotorula toruloides NP11 ]

    Gene ID: 27369253, updated on 3-Jan-2024

    Summary

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    Gene symbol
    RHTO_05240
    Gene description
    tetratricopeptide repeat containing protein
    Locus tag
    RHTO_05240
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rhodotorula toruloides NP11 (strain: NP11)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Microbotryomycetes; Sporidiobolales; Sporidiobolaceae; Rhodotorula
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    Genomic context

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    See RHTO_05240 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    6

    NW_015622991.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent rna helicase dbp2 Neighboring gene UDP-Glc/Gal endoplasmic reticulum nucleotide sugar transporter Neighboring gene ribosome recycling factor Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015622991.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A multi-omic map of the lipid-producing yeast Rhodosporidium toruloides. Zhu Z, et al. Nat Commun, 2012. PMID 23047670, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in receptor-mediated virion attachment to host cell IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tetratricopeptide repeat containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_015622991.1 Reference assembly

      Range
      26202..28673
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016418902.1 → XP_016270196.1  tetratricopeptide repeat containing protein [Rhodotorula toruloides NP11]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A061AH68, A0A0K3CFK8, M7WF74
    Nucleotide Protein
    Heading Accession and Version

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