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    E2B DNA polymerase;terminal protein precursor pTP [ Human mastadenovirus F ]

    Gene ID: 2715933, updated on 18-Aug-2023

    Summary

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    Gene symbol
    E2B
    Gene description
    DNA polymerase;terminal protein precursor pTP
    Locus tag
    HAdVF_gp06
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Human mastadenovirus F (strain: Dugan, serotype: Human adenovirus 40, acronym: HAdV-40, acronym: HAdV-F, nat-host: Homo sapiens)
    Lineage
    Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus
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    Genomic context

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    Sequence:
    NC_001454.1 (3649..25337, complement)

    NC_001454.1Genomic Context describing neighboring genes Neighboring gene control protein E1A Neighboring gene control protein E1B 19K;control protein E1B 55K Neighboring gene encapsidation protein IVa2 Neighboring gene capsid protein IX Neighboring gene capsid protein precursor pVIII;encapsidation protein 22K;hexon assembly protein 100K;protein 33K Neighboring gene fiber-2 Neighboring gene capsid protein precursor pVI;hexon;protease Neighboring gene core protein V;core protein precursor pVII;core protein precursor pX;penton base Neighboring gene fiber Neighboring gene capsid protein precursor pIIIa;encapsidation protein 52K Neighboring gene miscRNA Neighboring gene Neighboring gene single-stranded DNA-binding protein Neighboring gene membrane glycoprotein E3 CR1-alpha;membrane glycoprotein E3 CR1-beta Neighboring gene control protein E3 14.7K;membrane protein E3 RID-alpha;membrane protein E3 RID-beta Neighboring gene protein U

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001454.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The DNA sequence of adenovirus type 40. Davison AJ, et al. J Mol Biol, 1993 Dec 20. PMID 8263936

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    regulatory

    • Loc: c21065-21060 regulatory_class = polyA_signal_sequence
    • Loc: c21099-21094 regulatory_class = polyA_signal_sequence
    • Loc: c24317-24312 regulatory_class = TATA_box
    • Loc: c3654-3649 regulatory_class = polyA_signal_sequence
    • Loc: c3658-3653 regulatory_class = polyA_signal_sequence

    General protein information

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    Preferred Names
    DNA polymerase;terminal protein precursor pTP
    NP_040853.1
    • genus-common
    NP_040854.1
    • genus-common

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001454.1 Reference assembly

      Range
      3649..25337 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_040853.1 DNA polymerase [Human mastadenovirus F]

      See identical proteins and their annotated locations for NP_040853.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P48311
      UniProtKB/TrEMBL
      A0A6M6ABX9
      Conserved Domains (3) summary
      PHA02563
      Location:608 → 849
      PHA02563; DNA polymerase; Provisional
      cl10023
      Location:960 → 1027
      POLBc; DNA polymerase type-B family catalytic domain. DNA-directed DNA polymerases elongate DNA by adding nucleotide triphosphate (dNTP) residues to the 5'-end of the growing chain of DNA. DNA-directed DNA polymerases are multifunctional with both synthetic ...
      pfam03175
      Location:440 → 915
      DNA_pol_B_2; DNA polymerase type B, organellar and viral

    2. NP_040854.1 terminal protein precursor pTP [Human mastadenovirus F]

      See identical proteins and their annotated locations for NP_040854.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P48313
      UniProtKB/TrEMBL
      A0A142G3J7, A0A6M6AAQ0
      Conserved Domains (1) summary
      pfam02459
      Location:59 → 603
      Adeno_terminal; Adenoviral DNA terminal protein
    Nucleotide Protein
    Heading Accession and Version

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