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    UMAG_00894 tRNA 1-methyladenosine methyltransferase subunit GCD14 [ Mycosarcoma maydis (corn smut) ]

    Gene ID: 23562065, updated on 6-Nov-2024

    Summary

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    Gene symbol
    UMAG_00894
    Gene description
    tRNA 1-methyladenosine methyltransferase subunit GCD14
    Locus tag
    UMAG_00894
    See related
    FungiDB:UMAG_00894; VEuPathDB:UMAG_00894
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mycosarcoma maydis (strain: 521, culture-collection: FGSC:9021, type-material: neotype of Uredo maydis)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Mycosarcoma
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    Genomic context

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    See UMAG_00894 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_026479.1 (224655..226208, complement)

    Chromosome 2 - NC_026479.1Genomic Context describing neighboring genes Neighboring gene putative U6 snRNA-associated Sm-like protein LSm6 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Kinesin-7a motor protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_026479.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis. Kämper J, et al. Nature, 2006 Nov 2. PMID 17080091
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in tRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of tRNA (m1A) methyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA 1-methyladenosine methyltransferase subunit GCD14
    XP_011386909.1
    • related to GCD14 - translational repressor of GCN4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_026479.1 Reference assembly

      Range
      224655..226208 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011388607.1 → XP_011386909.1  tRNA 1-methyladenosine methyltransferase subunit GCD14 [Mycosarcoma maydis]

      See identical proteins and their annotated locations for XP_011386909.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0D1E5P9
      Conserved Domains (1) summary
      cl17173
      Location:72 → 403
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    Nucleotide Protein
    Heading Accession and Version

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