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    Gprc6a G protein-coupled receptor, family C, group 6, member A [ Mus musculus (house mouse) ]

    Gene ID: 210198, updated on 2-Nov-2024

    Summary

    Official Symbol
    Gprc6aprovided by MGI
    Official Full Name
    G protein-coupled receptor, family C, group 6, member Aprovided by MGI
    Primary source
    MGI:MGI:2429498
    See related
    Ensembl:ENSMUSG00000019905 AllianceGenome:MGI:2429498
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Enables G protein-coupled receptor activity. Involved in regulation of testosterone biosynthetic process and response to amino acid. Is active in plasma membrane. Is expressed in several structures, including femur; liver; male reproductive gland or organ; musculature; and spleen. Orthologous to human GPRC6A (G protein-coupled receptor class C group 6 member A). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Genomic context

    See Gprc6a in Genome Data Viewer
    Location:
    10 B3; 10 25.66 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (51490919..51507554, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (51614823..51631458, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 46224 Neighboring gene family with sequence similarity 162, member B Neighboring gene STARR-seq mESC enhancer starr_26663 Neighboring gene regulatory factor X, 6 Neighboring gene Sumo1 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (9)  1 citation

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC124360

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G protein-coupled receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables G protein-coupled receptor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    G-protein coupled receptor family C group 6 member A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_153071.1NP_694711.1  G-protein coupled receptor family C group 6 member A precursor

      See identical proteins and their annotated locations for NP_694711.1

      Status: PROVISIONAL

      Source sequence(s)
      AY101365
      Consensus CDS
      CCDS23834.1
      UniProtKB/Swiss-Prot
      Q5DK51, Q5DK52, Q8K4Z6
      Related
      ENSMUSP00000020062.4, ENSMUST00000020062.4
      Conserved Domains (4) summary
      cd06361
      Location:37506
      PBP1_GPC6A_like; Ligand-binding domain of the promiscuous L-alpha-amino acid receptor GPRC6A which is a broad-spectrum amino acid-sensing receptor
      pfam00003
      Location:605838
      7tm_3; 7 transmembrane sweet-taste receptor of 3 GCPR
      pfam01094
      Location:75482
      ANF_receptor; Receptor family ligand binding region
      pfam07562
      Location:520571
      NCD3G; Nine Cysteines Domain of family 3 GPCR

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      51490919..51507554 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)