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    VDAG_01193 high-affinity nicotinic acid transporter [ Verticillium dahliae VdLs.17 ]

    Gene ID: 20702656, updated on 14-Dec-2023

    Summary

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    Gene symbol
    VDAG_01193
    Gene description
    high-affinity nicotinic acid transporter
    Locus tag
    VDAG_01193
    Gene type
    protein coding
    RNA name
    high-affinity nicotinic acid transporter
    RefSeq status
    PROVISIONAL
    Organism
    Verticillium dahliae VdLs.17 (strain: VdLs.17)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Plectosphaerellaceae; Verticillium
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    Genomic context

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    See VDAG_01193 in Genome Data Viewer
    Location:
    chromosome: 1, map: unlocalized
    Exon count:
    7

    NW_009276916.1Genomic Context describing neighboring genes Neighboring gene calcium-dependent protein kinase Neighboring gene DNA mismatch repair protein msh6 Neighboring gene polyamine transporter 2 Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009276916.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    high-affinity nicotinic acid transporter

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_009276916.1 Reference assembly

      Range
      1156391..1158236
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009650079.1 → XP_009648374.1  high-affinity nicotinic acid transporter [Verticillium dahliae VdLs.17]

      See identical proteins and their annotated locations for XP_009648374.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2J8E7D7, G2WTS0
      Conserved Domains (2) summary
      cd06174
      Location:66 → 455
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      TIGR02332
      Location:42 → 425
      HpaX; 4-hydroxyphenylacetate permease
    Protein Accession Links
    GenPept Link UniProtKB Link
    EGY17511.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases