U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    GGTG_12888 hypothetical protein [ Gaeumannomyces tritici R3-111a-1 ]

    Gene ID: 20353346, updated on 17-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    GGTG_12888
    Gene description
    hypothetical protein
    Locus tag
    GGTG_12888
    See related
    FungiDB:GGTG_12888; VEuPathDB:GGTG_12888
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Gaeumannomyces tritici R3-111a-1 (strain: R3-111a-1, variety: tritici)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Magnaporthales; Magnaporthaceae; Gaeumannomyces
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See GGTG_12888 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_008804554.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene 3-ketodihydrosphingosine reductase tsc10 Neighboring gene hypothetical protein Neighboring gene smr domain-containing protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_008804554.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    part_of MICOS complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_008804554.1 Reference assembly

      Range
      143610..144488
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009230790.1 → XP_009229054.1  hypothetical protein GGTG_12888 [Gaeumannomyces tritici R3-111a-1]

      See identical proteins and their annotated locations for XP_009229054.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      J3PHA9
      Conserved Domains (1) summary
      pfam04418
      Location:11 → 77
      DUF543; Domain of unknown function (DUF543)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases