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    GGTG_00971 hypothetical protein [ Gaeumannomyces tritici R3-111a-1 ]

    Gene ID: 20341429, updated on 17-May-2024

    Summary

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    Gene symbol
    GGTG_00971
    Gene description
    hypothetical protein
    Locus tag
    GGTG_00971
    See related
    FungiDB:GGTG_00971; VEuPathDB:GGTG_00971
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Gaeumannomyces tritici R3-111a-1 (strain: R3-111a-1, variety: tritici)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Magnaporthales; Magnaporthaceae; Gaeumannomyces
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    Genomic context

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    See GGTG_00971 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    5

    NW_008804545.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene ubiquitin-protein ligase Sel1/Ubx2 Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008804545.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_008804545.1 Reference assembly

      Range
      3014430..3016695 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009218726.1 → XP_009216990.1  hypothetical protein GGTG_00971 [Gaeumannomyces tritici R3-111a-1]

      See identical proteins and their annotated locations for XP_009216990.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      J3NI88
      Conserved Domains (3) summary
      COG2319
      Location:71 → 338
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:70 → 105
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:110 → 338
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases