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    PPTG_04035 ADP-ribosylation factor [ Phytophthora parasitica INRA-310 ]

    Gene ID: 20174155, updated on 17-May-2024

    Summary

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    Gene symbol
    PPTG_04035
    Gene description
    ADP-ribosylation factor
    Locus tag
    PPTG_04035
    See related
    FungiDB:PPTG_04035; VEuPathDB:PPTG_04035
    Gene type
    protein coding
    RNA name
    ADP-ribosylation factor
    RefSeq status
    PROVISIONAL
    Organism
    Phytophthora parasitica INRA-310 (strain: INRA-310)
    Lineage
    Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora
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    Genomic context

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    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_008648992.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene V-type ATPase, F subunit Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008648992.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    ADP-ribosylation factor

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_008648992.1 Reference assembly

      Range
      1022611..1025368
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008897847.1 → XP_008896095.1  ADP-ribosylation factor [Phytophthora parasitica INRA-310]

      See identical proteins and their annotated locations for XP_008896095.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      W2R1P0
      Conserved Domains (2) summary
      COG1100
      Location:13 → 138
      Gem1; GTPase SAR1 family domain [General function prediction only]
      cl21455
      Location:1 → 214
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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