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    PVVCY_0100600 long chain polyunsaturated fatty acid elongation enzyme, putative [ Plasmodium vinckei vinckei ]

    Gene ID: 19963013, updated on 5-Sep-2024

    Summary

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    Gene symbol
    PVVCY_0100600
    Gene description
    long chain polyunsaturated fatty acid elongation enzyme, putative
    Locus tag
    PVVCY_0100600
    See related
    PlasmoDB:PVVCY_0100600; VEuPathDB:PVVCY_0100600
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium vinckei vinckei (sub-species: vinckei)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia)
    Old locus tag
    YYE_04807
    Orthologs
    Plasmodium falciparum all
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    Genomic context

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    See PVVCY_0100600 in Genome Data Viewer
    Location:
    chromosome: PVVCY_01
    Exon count:
    5
    Sequence:
    Chromosome: PVVCY_01; NC_051293.1 (223902..225379)

    Chromosome PVVCY_01 - NC_051293.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene DNA repair protein RAD50, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene RNA-binding protein, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_051293.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fatty acid elongase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid elongation, monounsaturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty acid elongation, polyunsaturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty acid elongation, saturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sphingolipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in very long-chain fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    long chain polyunsaturated fatty acid elongation enzyme, putative
    XP_037490008.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_051293.1 Reference assembly

      Range
      223902..225379
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037634953.1 → XP_037490008.1  long chain polyunsaturated fatty acid elongation enzyme, putative [Plasmodium vinckei vinckei]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A449BM05, A0A6V7RUE0
      Conserved Domains (1) summary
      pfam01151
      Location:33 → 288
      ELO; GNS1/SUR4 family
    Nucleotide Protein
    Heading Accession and Version

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