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    LOC18436530 NAC domain-containing protein 19 [ Amborella trichopoda ]

    Gene ID: 18436530, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC18436530
    Gene description
    NAC domain-containing protein 19
    Locus tag
    AMTR_s02859p00001300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Amborella trichopoda
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC18436530 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current AMTR1.0 (GCF_000471905.2) Unplaced Scaffold NW_006498904.1 (113..4983, complement)

    NW_006498904.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006498904.1 Unplaced Scaffold Reference AMTR1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NAC domain-containing protein 19

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Amborella trichopoda Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AMTR1.0 Primary Assembly

    Genomic

    1. NW_006498904.1 Reference AMTR1.0 Primary Assembly

      Range
      113..4983 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006846685.2 → XP_006846748.2  NAC domain-containing protein 19

      UniProtKB/TrEMBL
      U5CVE1
      Conserved Domains (1) summary
      pfam02365
      Location:68 → 96
      NAM; No apical meristem (NAM) protein
    Nucleotide Protein
    Heading Accession and Version

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