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    TRM7 tRNA (uridine-2'-O-)-methyltransferase trm7 [ Yamadazyma tenuis ]

    Gene ID: 18246152, updated on 10-Jul-2024

    Summary

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    Gene symbol
    TRM7
    Gene description
    tRNA (uridine-2'-O-)-methyltransferase trm7
    Locus tag
    PSN45_001359
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Yamadazyma tenuis (strain: ATCC 10573, type-material: type material of Candida tenuis)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Yamadazyma
    Old locus tag
    CANTEDRAFT_109917
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    Genomic context

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    See TRM7 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_089462.1 (202528..203427, complement)

    Chromosome 2 - NC_089462.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene lysyl-tRNA synthetase Neighboring gene mitochondrial 37S ribosomal protein uS10m Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_089462.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tRNA methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA (uridine-2'-O-)-methyltransferase trm7
    XP_006690063.1
    • EggNog:ENOG503NVWX; COG:D

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_089462.1 Reference assembly

      Range
      202528..203427 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006690000.1 → XP_006690063.1  tRNA (uridine-2'-O-)-methyltransferase trm7 [Yamadazyma tenuis]

      See identical proteins and their annotated locations for XP_006690063.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      G3BCP6
      Conserved Domains (1) summary
      COG0293
      Location:1 → 205
      RlmE; 23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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