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    Npy5r neuropeptide Y receptor Y5 [ Mus musculus (house mouse) ]

    Gene ID: 18168, updated on 2-Nov-2024

    Summary

    Official Symbol
    Npy5rprovided by MGI
    Official Full Name
    neuropeptide Y receptor Y5provided by MGI
    Primary source
    MGI:MGI:108082
    See related
    Ensembl:ENSMUSG00000044014 AllianceGenome:MGI:108082
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Y5R; NPY5-R; NPYY5-R
    Summary
    Enables pancreatic polypeptide receptor activity and peptide YY receptor activity. Involved in synaptic signaling via neuropeptide. Acts upstream of or within chemical synaptic transmission. Located in membrane and neuron projection. Is active in GABA-ergic synapse and presynapse. Is expressed in central nervous system and retina. Human ortholog(s) of this gene implicated in lipid metabolism disorder and obesity. Orthologous to human NPY5R (neuropeptide Y receptor Y5). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in cortex adult (RPKM 1.1), frontal lobe adult (RPKM 1.0) and 5 other tissues See more
    Orthologs
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    Genomic context

    See Npy5r in Genome Data Viewer
    Location:
    8 B3.1; 8 33.15 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (67132617..67140746, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (66679965..66688094, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 32568 Neighboring gene transketolase-like 2 Neighboring gene STARR-seq mESC enhancer starr_21675 Neighboring gene STARR-seq mESC enhancer starr_21676 Neighboring gene STARR-seq mESC enhancer starr_21677 Neighboring gene neuropeptide Y receptor Y1 Neighboring gene STARR-seq mESC enhancer starr_21679 Neighboring gene RNA binding motif protein 7 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (4)  1 citation

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC151353, MGC151355

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables neuropeptide Y receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables neuropeptide Y receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables neuropeptide binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables pancreatic polypeptide receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables pancreatic polypeptide receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables pancreatic polypeptide receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables peptide YY receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables peptide YY receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables peptide YY receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cardiac left ventricle morphogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cardiac left ventricle morphogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in chemical synaptic transmission IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within chemical synaptic transmission IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in eating behavior IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in eating behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in generation of ovulation cycle rhythm IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in generation of ovulation cycle rhythm ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of acute inflammatory response to antigenic stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of acute inflammatory response to antigenic stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of glutamate secretion IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of glutamate secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of synaptic transmission, GABAergic IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of synaptic transmission, GABAergic ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in neuropeptide signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in outflow tract morphogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in outflow tract morphogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of ERK1 and ERK2 cascade IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of ERK1 and ERK2 cascade ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of acute inflammatory response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of acute inflammatory response ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cell population proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of smooth muscle cell proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of smooth muscle cell proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in synaptic signaling via neuropeptide EXP
    Inferred from Experiment
    more info
    PubMed 
    involved_in synaptic signaling via neuropeptide IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in GABA-ergic synapse EXP
    Inferred from Experiment
    more info
    PubMed 
    is_active_in GABA-ergic synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in neuron projection IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in neuron projection IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in presynapse IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    neuropeptide Y receptor type 5
    Names
    NPY-Y5 receptor
    Y5 receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001358957.1NP_001345886.1  neuropeptide Y receptor type 5

      Status: VALIDATED

      Source sequence(s)
      AC100541
      Consensus CDS
      CCDS22335.1
      UniProtKB/Swiss-Prot
      O35380, O70342, Q9JMK1
      UniProtKB/TrEMBL
      Q543U8
      Conserved Domains (1) summary
      cd15398
      Location:63456
      7tmA_NPY5R; neuropeptide Y receptor type 5, member of the class A family of seven-transmembrane G protein-coupled receptors
    2. NM_001358958.1NP_001345887.1  neuropeptide Y receptor type 5

      Status: VALIDATED

      Source sequence(s)
      AC100541
      Consensus CDS
      CCDS22335.1
      UniProtKB/Swiss-Prot
      O35380, O70342, Q9JMK1
      UniProtKB/TrEMBL
      Q543U8
      Related
      ENSMUSP00000148589.2, ENSMUST00000212563.2
      Conserved Domains (1) summary
      cd15398
      Location:63456
      7tmA_NPY5R; neuropeptide Y receptor type 5, member of the class A family of seven-transmembrane G protein-coupled receptors
    3. NM_016708.3NP_057917.2  neuropeptide Y receptor type 5

      See identical proteins and their annotated locations for NP_057917.2

      Status: VALIDATED

      Source sequence(s)
      AK045587, BB346009, BB868845, BY008559, BY655564
      Consensus CDS
      CCDS22335.1
      UniProtKB/Swiss-Prot
      O35380, O70342, Q9JMK1
      UniProtKB/TrEMBL
      Q543U8
      Related
      ENSMUSP00000065157.8, ENSMUST00000070810.8
      Conserved Domains (1) summary
      cd15398
      Location:63456
      7tmA_NPY5R; neuropeptide Y receptor type 5, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      67132617..67140746 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036153813.1XP_036009706.1  neuropeptide Y receptor type 5 isoform X1

      UniProtKB/Swiss-Prot
      O35380, O70342, Q9JMK1
      UniProtKB/TrEMBL
      Q543U8
      Conserved Domains (1) summary
      cd15398
      Location:63456
      7tmA_NPY5R; neuropeptide Y receptor type 5, member of the class A family of seven-transmembrane G protein-coupled receptors