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    LOC18099142 uncharacterized LOC18099142 [ Populus trichocarpa (black cottonwood) ]

    Gene ID: 18099142, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC18099142
    Gene description
    uncharacterized LOC18099142
    Locus tag
    POPTR_005G109000v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus trichocarpa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

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    See LOC18099142 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current P.trichocarpa_v4.1 (GCF_000002775.5) 5 NC_037289.2 (7899997..7902384, complement)
    101 previous assembly Pop_tri_v3 (GCF_000002775.4) 5 NC_037289.1 (8374572..8376979, complement)

    Chromosome 5 - NC_037289.2Genomic Context describing neighboring genes Neighboring gene pre-rRNA-processing protein esf1 Neighboring gene peroxidase 64 Neighboring gene uncharacterized LOC18099143 Neighboring gene aquaporin PIP2-7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC18099142
    Names
    methyltransferase-like protein 23

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.trichocarpa_v4.1 Primary Assembly

    Genomic

    1. NC_037289.2 Reference P.trichocarpa_v4.1 Primary Assembly

      Range
      7899997..7902384 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024602321.2 → XP_024458089.2  uncharacterized protein LOC18099142 isoform X2

    2. XM_006382989.3 → XP_006383051.2  uncharacterized protein LOC18099142 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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