U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC18055875 30S ribosomal protein S17 [ Citrus x clementina ]

    Gene ID: 18055875, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC18055875
    Gene description
    30S ribosomal protein S17
    Locus tag
    CICLE_v10009986mg
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Citrus x clementina
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC18055875 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006263303.1 (26177217..26178678, complement)

    NW_006263303.1Genomic Context describing neighboring genes Neighboring gene heavy metal-associated isoprenylated plant protein 28 Neighboring gene pentatricopeptide repeat-containing protein At4g31070, mitochondrial Neighboring gene uncharacterized LOC18055876 Neighboring gene probable starch synthase 4, chloroplastic/amyloplastic

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_006263303 Unplaced Scaffold Reference Citrus_clementina_v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC18055875

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Citrus_clementina_v1.0

    Genomic

    1. NW_006263303.1 Reference Citrus_clementina_v1.0

      Range
      26177217..26178678 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006453092.2 → XP_006453155.1  uncharacterized protein LOC18055875

      See identical proteins and their annotated locations for XP_006453155.1

      UniProtKB/TrEMBL
      V4UQ21
      Conserved Domains (1) summary
      PRK05610
      Location:2 → 79
      rpsQ; 30S ribosomal protein S17; Reviewed
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases