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    LOC18052079 zinc finger protein 4 [ Citrus x clementina ]

    Gene ID: 18052079, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC18052079
    Gene description
    zinc finger protein 4
    Locus tag
    CICLE_v10016402mg
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Citrus x clementina
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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    Genomic context

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    See LOC18052079 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262688.1 (26669489..26674119, complement)

    NW_006262688.1Genomic Context describing neighboring genes Neighboring gene probable ascorbate-specific transmembrane electron transporter 1 Neighboring gene protein OBERON 3 Neighboring gene histidine kinase 4 Neighboring gene brassinosteroid-related acyltransferase 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006262688 Unplaced Scaffold Reference Citrus_clementina_v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of abscisic acid-activated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Citrus_clementina_v1.0

    Genomic

    1. NW_006262688.1 Reference Citrus_clementina_v1.0

      Range
      26669489..26674119 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024192125.1 → XP_024047893.1  zinc finger protein 4

      UniProtKB/TrEMBL
      V4UB17
      Conserved Domains (1) summary
      pfam13912
      Location:94 → 120
      zf-C2H2_6; C2H2-type zinc finger

    2. XM_006448044.2 → XP_006448107.1  zinc finger protein 4

      See identical proteins and their annotated locations for XP_006448107.1

      UniProtKB/TrEMBL
      V4UB17
      Conserved Domains (1) summary
      pfam13912
      Location:94 → 120
      zf-C2H2_6; C2H2-type zinc finger

    3. XM_006448040.2 → XP_006448103.1  zinc finger protein 4

      See identical proteins and their annotated locations for XP_006448103.1

      UniProtKB/TrEMBL
      V4UB17
      Conserved Domains (1) summary
      pfam13912
      Location:94 → 120
      zf-C2H2_6; C2H2-type zinc finger

    4. XM_006448046.2 → XP_006448109.1  zinc finger protein 4

      See identical proteins and their annotated locations for XP_006448109.1

      UniProtKB/TrEMBL
      V4UB17
      Conserved Domains (1) summary
      pfam13912
      Location:94 → 120
      zf-C2H2_6; C2H2-type zinc finger

    5. XM_024192124.1 → XP_024047892.1  zinc finger protein 4

      UniProtKB/TrEMBL
      V4UB17
      Conserved Domains (1) summary
      pfam13912
      Location:94 → 120
      zf-C2H2_6; C2H2-type zinc finger

    6. XM_024192123.1 → XP_024047891.1  zinc finger protein 4

      UniProtKB/TrEMBL
      V4UB17
      Conserved Domains (1) summary
      pfam13912
      Location:94 → 120
      zf-C2H2_6; C2H2-type zinc finger

    7. XM_024192122.1 → XP_024047890.1  zinc finger protein 4

      UniProtKB/TrEMBL
      V4UB17
      Conserved Domains (1) summary
      pfam13912
      Location:94 → 120
      zf-C2H2_6; C2H2-type zinc finger

    8. XM_024192126.1 → XP_024047894.1  zinc finger protein 4

      UniProtKB/TrEMBL
      V4UB17
      Conserved Domains (1) summary
      pfam13912
      Location:94 → 120
      zf-C2H2_6; C2H2-type zinc finger

    9. XM_024192121.1 → XP_024047889.1  zinc finger protein 4

      UniProtKB/TrEMBL
      V4UB17
      Conserved Domains (1) summary
      pfam13912
      Location:94 → 120
      zf-C2H2_6; C2H2-type zinc finger
    Nucleotide Protein
    Heading Accession and Version

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