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    K07B1.7 G-patch domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179318, updated on 2-Nov-2024

    Summary

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    Official Symbol
    K07B1.7
    Official Full Name
    G-patch domain-containing protein
    Primary source
    WormBase:WBGene00019467
    Locus tag
    CELE_K07B1.7
    See related
    AllianceGenome:WB:WBGene00019467
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable nucleic acid binding activity. Predicted to be involved in positive regulation of DNA-templated transcription. Orthologous to human GPATCH3 (G-patch domain containing 3). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See K07B1.7 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (9345022..9346962, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial Neighboring gene Target Of Splicing Neighboring gene Trypsin-like protease try-5 Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in negative regulation of RIG-I signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in negative regulation of type I interferon production IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in positive regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    G-patch domain-containing protein
    NP_001317743.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      9345022..9346962 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001330874.2 → NP_001317743.1  G-patch domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O01886
      Conserved Domains (1) summary
      pfam01585
      Location:397 → 434
      G-patch; G-patch domain

    RNA

    1. NR_138502.1 RNA Sequence

      Status: REVIEWED

    2. NR_138499.1 RNA Sequence

      Status: REVIEWED

    3. NR_138501.1 RNA Sequence

      Status: REVIEWED

    4. NR_138500.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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