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    COCSUDRAFT_27367 WD40 repeat-like protein [ Coccomyxa subellipsoidea C-169 ]

    Gene ID: 17043659, updated on 28-Dec-2023

    Summary

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    Gene symbol
    COCSUDRAFT_27367
    Gene description
    WD40 repeat-like protein
    Locus tag
    COCSUDRAFT_27367
    Gene type
    protein coding
    RNA name
    WD40 repeat-like protein
    RefSeq status
    PROVISIONAL
    Organism
    Coccomyxa subellipsoidea C-169 (strain: C-169)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa
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    Genomic context

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    Exon count:
    8

    NW_005178040.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene general substrate transporter Neighboring gene Aminomethyltransferase folate-binding domain-containing protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_005178040.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation. Blanc G, et al. Genome Biol, 2012 May 25. PMID 22630137, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    WD40 repeat-like protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_005178040.1 Reference assembly

      Range
      60031..62760 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005650134.1 → XP_005650191.1  WD40 repeat-like protein [Coccomyxa subellipsoidea C-169]

      See identical proteins and their annotated locations for XP_005650191.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      I0Z4S8
      Conserved Domains (3) summary
      COG2319
      Location:12 → 303
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:15 → 304
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:26 → 63
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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