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    CAOG_00819 centaurin [ Capsaspora owczarzaki ATCC 30864 ]

    Gene ID: 14902523, updated on 9-Nov-2023

    Summary

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    Gene symbol
    CAOG_00819
    Gene description
    centaurin
    Locus tag
    CAOG_00819
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Capsaspora owczarzaki ATCC 30864 (strain: ATCC 30864, nat-host: pulmonate snail, culture-collection: ATCC:30864)
    Lineage
    Eukaryota; Filasterea; Capsaspora
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    Genomic context

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    Location:
    chromosome: Unknown
    Exon count:
    4

    NW_011887292.1Genomic Context describing neighboring genes Neighboring gene methionyl-tRNA synthetase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene phosphoserine phosphatase Neighboring gene serine/threonine-protein kinase cst-1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_011887292.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    centaurin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_011887292.1 Reference assembly

      Range
      2615091..2619486 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004365633.2 → XP_004365690.1  centaurin [Capsaspora owczarzaki ATCC 30864]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0D2VH97
      Conserved Domains (5) summary
      smart00233
      Location:326 → 357
      PH; Pleckstrin homology domain
      pfam00169
      Location:1034 → 1132
      PH; PH domain
      pfam01412
      Location:647 → 781
      ArfGap; Putative GTPase activating protein for Arf
      cl12013
      Location:3 → 270
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
      cl17171
      Location:1024 → 1132
      PH-like; Pleckstrin homology-like domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    EFW40294.1

    Gene LinkOut

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    Molecular Biology Databases