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    DFA_00844 uncharacterized protein [ Cavenderia fasciculata ]

    Gene ID: 14873730, updated on 28-Dec-2023

    Summary

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    Gene symbol
    DFA_00844
    Gene description
    uncharacterized protein
    Locus tag
    DFA_00844
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cavenderia fasciculata (isolate: SH3)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Acytosteliales; Cavenderiaceae; Cavenderia
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    Genomic context

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    See DFA_00844 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    8

    NW_004457729.1Genomic Context describing neighboring genes Neighboring gene Shwachman-Bodian-Diamond syndrome protein Neighboring gene molybdenum cofactor sulfurase Neighboring gene uncharacterized protein Neighboring gene 26S proteasome non-ATPase regulatory subunit 14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004457729.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in DNA-templated DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nuclear replication fork IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_004457729.1 Reference assembly

      Range
      1320806..1324325 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004358768.1 → XP_004358825.1  uncharacterized protein DFA_00844 [Cavenderia fasciculata]

      See identical proteins and their annotated locations for XP_004358825.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      F4PU49
      Conserved Domains (4) summary
      COG2319
      Location:26 → 368
      WD40; WD40 repeat [General function prediction only]
      pfam12341
      Location:528 → 809
      Mcl1_mid; Minichromosome loss protein, Mcl1, middle region
      sd00039
      Location:72 → 124
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:33 → 332
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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