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    PithCp074 ORF57a [ Pinus thunbergii (Japanese black pine) ]

    Gene ID: 1457669, updated on 30-Jan-2018

    Summary

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    Gene symbol
    PithCp074
    Gene description
    ORF57a
    Locus tag
    PithCp074
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Pinus thunbergii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Pinales; Pinaceae; Pinus; Pinus
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    Genomic context

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    Sequence:
    NC_001631.1 (49635..49808, complement)

    NC_001631.1Genomic Context describing neighboring genes Neighboring gene ORF67a Neighboring gene ORF133 Neighboring gene tRNA-His Neighboring gene tRNA-Thr

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001631.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new gene encoding tRNA(Pro) (GGG) is present in the chloroplast genome of black pine: a compilation of 32 tRNA genes from black pine chloroplasts. Tsudzuki J, et al. Curr Genet, 1994 Aug. PMID 8001170
    2. Loss of all ndh genes as determined by sequencing the entire chloroplast genome of the black pine Pinus thunbergii. Wakasugi T, et al. Proc Natl Acad Sci U S A, 1994 Oct 11. PMID 7937893, Free PMC Article
    3. Chloroplast DNA of black pine retains a residual inverted repeat lacking rRNA genes: nucleotide sequences of trnQ, trnK, psbA, trnI and trnH and the absence of rps16. Tsudzuki J, et al. Mol Gen Genet, 1992 Mar. PMID 1557027

    GeneRIFs: Gene References Into Functions

    General protein information

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    Names
    ORF57a

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001631.1 Reference assembly

      Range
      49635..49808 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_042420.1 ORF57a (chloroplast) [Pinus thunbergii]

      See identical proteins and their annotated locations for NP_042420.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q32961
    Nucleotide Protein
    Heading Accession and Version