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    mt-nd5 NADH dehydrogenase 5, mitochondrial [ Danio rerio (zebrafish) ]

    Gene ID: 140535, updated on 2-Nov-2024

    Summary

    Official Symbol
    mt-nd5provided by ZNC
    Official Full Name
    NADH dehydrogenase 5, mitochondrialprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-011205-12
    See related
    AllianceGenome:ZFIN:ZDB-GENE-011205-12
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    mtnd5; ND5
    Summary
    Predicted to enable NADH dehydrogenase (ubiquinone) activity. Predicted to be involved in electron transport coupled proton transport; mitochondrial electron transport, NADH to ubiquinone; and mitochondrial respiratory chain complex I assembly. Predicted to act upstream of or within ATP synthesis coupled electron transport. Predicted to be located in mitochondrial inner membrane. Predicted to be part of respiratory chain complex I. Is expressed in muscle and skeletal muscle. Human ortholog(s) of this gene implicated in Leber hereditary optic neuropathy; Leigh disease; and MELAS syndrome. Orthologous to human MT-ND5 (mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See mt-nd5 in Genome Data Viewer
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) MT (non-nuclear) NC_002333.2 (12897..14717)
    105 previous assembly GRCz10 (GCF_000002035.5) MT (non-nuclear) NC_002333.2 (12897..14717)

    Chromosome MT - NC_002333.2Genomic Context describing neighboring genes Neighboring gene tRNA-His Neighboring gene tRNA-Ser Neighboring gene tRNA-Leu Neighboring gene NADH dehydrogenase subunit 6 Neighboring gene tRNA-Glu Neighboring gene cytochrome b

    Genomic regions, transcripts, and products

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables NADH dehydrogenase (ubiquinone) activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables NADH dehydrogenase (ubiquinone) activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within ATP synthesis coupled electron transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in electron transport coupled proton transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitochondrial electron transport, NADH to ubiquinone ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in mitochondrial respiratory chain complex I assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial inner membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     
    part_of respiratory chain complex I IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    NADH dehydrogenase subunit 5

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002333.2 Reference assembly

      Range
      12897..14717
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_059341.1 NADH dehydrogenase subunit 5 (mitochondrion) [Danio rerio]

      See identical proteins and their annotated locations for NP_059341.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9MIY0
      Conserved Domains (4) summary
      MTH00137
      Location:1602
      ND5; NADH dehydrogenase subunit 5; Provisional
      pfam00361
      Location:134417
      Proton_antipo_M; Proton-conducting membrane transporter
      pfam00662
      Location:66112
      Proton_antipo_N; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
      pfam06455
      Location:423602
      NADH5_C; NADH dehydrogenase subunit 5 C-terminus