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    LOC135229097 zinc finger X-chromosomal protein-like [ Loxodonta africana (African savanna elephant) ]

    Gene ID: 135229097, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC135229097
    Gene description
    zinc finger X-chromosomal protein-like
    See related
    EnsemblRapid:ENSLAFG00000006691
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Loxodonta africana
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
    Also known as
    ZFY
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    Genomic context

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    See LOC135229097 in Genome Data Viewer
    Location:
    chromosome: Y
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) Y NC_087370.1 (15393970..15436050, complement)

    Chromosome Y - NC_087370.1Genomic Context describing neighboring genes Neighboring gene amelogenin X-linked Neighboring gene U6 spliceosomal RNA Neighboring gene eukaryotic translation initiation factor 2 subunit 3, Y-linked Neighboring gene membrane-bound transcription factor site-2 protease-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_087370.1 Chromosome Y Reference mLoxAfr1.hap2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Origins and functional evolution of Y chromosomes across mammals. Cortez D, et al. Nature, 2014 Apr 24. PMID 24759410
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger X-chromosomal protein-like
    Names
    zinc finger protein, Y-linked

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mLoxAfr1.hap2

    Genomic

    1. NC_087370.1 Reference mLoxAfr1.hap2

      Range
      15393970..15436050 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_064278897.1 → XP_064134967.1  zinc finger X-chromosomal protein-like isoform X1

      UniProtKB/TrEMBL
      W8CC83
      Related
      ENSLAFP00000005619.4, ENSLAFT00000006689.4

    2. XM_064278898.1 → XP_064134968.1  zinc finger X-chromosomal protein-like isoform X2

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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