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    LDBPK_170170 elongation factor 1-alpha [ Leishmania donovani ]

    Gene ID: 13393332, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LDBPK_170170
    Gene description
    elongation factor 1-alpha
    Locus tag
    LDBPK_170170
    Gene type
    protein coding
    RNA name
    elongation factor 1-alpha
    RefSeq status
    PROVISIONAL
    Organism
    Leishmania donovani (strain: BPK282A1)
    Lineage
    Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Leishmaniinae; Leishmania
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    Genomic context

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    See LDBPK_170170 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    1
    Sequence:
    Chromosome: 17; NC_018244.1 (68123..69472, complement)

    Chromosome 17 - NC_018244.1Genomic Context describing neighboring genes Neighboring gene receptor-type adenylate cyclase b Neighboring gene receptor-type adenylate cyclase b Neighboring gene elongation factor 1-alpha Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_018244.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Whole genome sequencing of multiple Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance. Downing T, et al. Genome Res, 2011 Dec. PMID 22038251, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation elongation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translational elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    elongation factor 1-alpha

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_018244.1 Reference assembly

      Range
      68123..69472 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003859825.1 → XP_003859873.1  elongation factor 1-alpha [Leishmania donovani]

      See identical proteins and their annotated locations for XP_003859873.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0R4J963, A0A504Y2I6, A0A504Y4Y4, E9BD40, Q95VF2
      Conserved Domains (1) summary
      PTZ00141
      Location:1 → 438
      PTZ00141; elongation factor 1- alpha; Provisional
    Nucleotide Protein
    Heading Accession and Version

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