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    si:dkey-219c10.4 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A [ Tachysurus vachellii ]

    Gene ID: 132850637, updated on 3-Apr-2024

    Summary

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    Gene symbol
    si:dkey-219c10.4
    Gene description
    high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tachysurus vachellii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Tachysurus
    Orthologs
    zebrafish all
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    Genomic context

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    See si:dkey-219c10.4 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_11 current HZAU_Pvac_v1 (GCF_030014155.1) 8 NC_083467.1 (11898485..11908450, complement)

    Chromosome 8 - NC_083467.1Genomic Context describing neighboring genes Neighboring gene signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 Neighboring gene calcium channel, voltage-dependent, beta 4a subunit Neighboring gene small nucleolar RNA ACA64 Neighboring gene small nucleolar RNA ACA64 Neighboring gene nucleolar protein interacting with the FHA domain of MKI67

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_083467.1 Chromosome 8 Reference HZAU_Pvac_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cGMP catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cGMP-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030014155.1-RS_2023_11

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HZAU_Pvac_v1 Primary Assembly

    Genomic

    1. NC_083467.1 Reference HZAU_Pvac_v1 Primary Assembly

      Range
      11898485..11908450 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_060877286.1 → XP_060733269.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

      UniProtKB/TrEMBL
      A0AA88T0R3
    Nucleotide Protein
    Heading Accession and Version

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