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    LOC132836936 VIP36-like protein [ Hemiscyllium ocellatum (epaulette shark) ]

    Gene ID: 132836936, updated on 19-Jun-2024

    Summary

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    Gene symbol
    LOC132836936
    Gene description
    VIP36-like protein
    See related
    EnsemblRapid:ENSHOEG00000013015
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hemiscyllium ocellatum
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Hemiscylliidae; Hemiscyllium
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    Genomic context

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    See LOC132836936 in Genome Data Viewer
    Location:
    chromosome: 48
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_11 current sHemOce1.pat.X.cur. (GCF_020745735.1) 48 NC_083448.1 (5960640..5978257, complement)

    Chromosome 48 - NC_083448.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 39 Neighboring gene myoferlin-like Neighboring gene metal transporter CNNM2-like Neighboring gene metal transporter CNNM3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_083448.1 Chromosome 48 Reference sHemOce1.pat.X.cur.

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables D-mannose binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables enzyme regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in COPII-coated ER to Golgi transport vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum-Golgi intermediate compartment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    VIP36-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_020745735.1-RS_2023_11

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference sHemOce1.pat.X.cur.

    Genomic

    1. NC_083448.1 Reference sHemOce1.pat.X.cur.

      Range
      5960640..5978257 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_060856514.1 → XP_060712497.1  VIP36-like protein

      Related
      ENSHOEP00000025258.1, ENSHOET00000029415.1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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