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    LOC131234513 glutamine--tRNA ligase [ Magnolia sinica ]

    Gene ID: 131234513, updated on 2-Nov-2023

    Summary

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    Gene symbol
    LOC131234513
    Gene description
    glutamine--tRNA ligase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Magnolia sinica
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Magnoliidae; Magnoliales; Magnoliaceae; Magnolia
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    Genomic context

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    See LOC131234513 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    RS_2023_07 current MsV1 (GCF_029962835.1) 19 NC_080591.1 (10395539..10441041, complement)

    Chromosome 19 - NC_080591.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC131234514 Neighboring gene uncharacterized LOC131234515 Neighboring gene small ribosomal subunit protein eS7 Neighboring gene mannose-6-phosphate isomerase 2 Neighboring gene small nucleolar RNA R71

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_080591.1 Chromosome 19 Reference MsV1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glutamine-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glutaminyl-tRNA aminoacylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glutamine--tRNA ligase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029962835.1-RS_2023_07

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MsV1

    Genomic

    1. NC_080591.1 Reference MsV1

      Range
      10395539..10441041 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_058231453.1 → XP_058087436.1  glutamine--tRNA ligase isoform X2

    2. XM_058231452.1 → XP_058087435.1  glutamine--tRNA ligase isoform X1

    3. XM_058231454.1 → XP_058087437.1  glutamine--tRNA ligase isoform X3

    Nucleotide Protein
    Heading Accession and Version

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