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    LOC130545339 laminin subunit beta-2-like [ Triplophysa rosa ]

    Gene ID: 130545339, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC130545339
    Gene description
    laminin subunit beta-2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Triplophysa rosa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
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    Genomic context

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    See LOC130545339 in Genome Data Viewer
    Location:
    chromosome: LG21
    Exon count:
    22
    Annotation release Status Assembly LG Location
    RS_2023_06 current Trosa_1v2 (GCF_024868665.1) LG21 NC_079910.1 (11435439..11445662)

    Linkage Group LG21 - NC_079910.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130571942 Neighboring gene laminin, beta 2-like Neighboring gene laminin, beta 2 (laminin S) Neighboring gene ubiquitin specific peptidase 19 Neighboring gene uncharacterized si:dkey-32e6.3 Neighboring gene leucine rich repeat containing 23

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_079910.1 Chromosome LG21 Reference Trosa_1v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables extracellular matrix structural constituent IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables integrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in basement membrane assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in substrate adhesion-dependent cell spreading IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of laminin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    laminin subunit beta-2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_024868665.1-RS_2023_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Trosa_1v2 Primary Assembly

    Genomic

    1. NC_079910.1 Reference Trosa_1v2 Primary Assembly

      Range
      11435439..11445662
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_057319775.1 → XP_057175758.1  laminin subunit beta-2-like

    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases