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    LOC130143173 transducin-like enhancer protein 1 [ Falco biarmicus (lanner falcon) ]

    Gene ID: 130143173, updated on 3-Aug-2024

    Summary

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    Gene symbol
    LOC130143173
    Gene description
    transducin-like enhancer protein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Falco biarmicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
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    Genomic context

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    See LOC130143173 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    RS_2023_05 current bFalBia1.pri (GCF_023638135.1) Z NC_079311.1 (43454542..43617059)

    Chromosome Z - NC_079311.1Genomic Context describing neighboring genes Neighboring gene FERM domain containing 3 Neighboring gene RAS and EF-hand domain containing Neighboring gene transducin-like enhancer protein 4 Neighboring gene phosphoserine aminotransferase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_079311.1 Chromosome Z Reference bFalBia1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transducin-like enhancer protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_023638135.1-RS_2023_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bFalBia1.pri

    Genomic

    1. NC_079311.1 Reference bFalBia1.pri

      Range
      43454542..43617059
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_056325833.1 → XP_056181808.1  transducin-like enhancer protein 1 isoform X7

    2. XM_056325827.1 → XP_056181802.1  transducin-like enhancer protein 1 isoform X1

    3. XM_056325832.1 → XP_056181807.1  transducin-like enhancer protein 1 isoform X6

    4. XM_056325828.1 → XP_056181803.1  transducin-like enhancer protein 1 isoform X2

    5. XM_056325830.1 → XP_056181805.1  transducin-like enhancer protein 1 isoform X4

    6. XM_056325831.1 → XP_056181806.1  transducin-like enhancer protein 1 isoform X5

    7. XM_056325829.1 → XP_056181804.1  transducin-like enhancer protein 1 isoform X3

    RNA

    1. XR_008819668.1 RNA Sequence

    2. XR_008819669.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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