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    LOC129311037 phosphomevalonate kinase, peroxisomal [ Prosopis cineraria ]

    Gene ID: 129311037, updated on 16-Nov-2023

    Summary

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    Gene symbol
    LOC129311037
    Gene description
    phosphomevalonate kinase, peroxisomal
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Prosopis cineraria
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Caesalpinioideae; mimosoid clade; Mimoseae; Prosopis
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    Genomic context

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    See LOC129311037 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_03 current ASM2901754v1 (GCF_029017545.1) Unplaced Scaffold NW_026555336.1 (37481293..37487771)

    NW_026555336.1Genomic Context describing neighboring genes Neighboring gene protein IWS1 homolog 1 Neighboring gene UV-B-induced protein At3g17800, chloroplastic Neighboring gene pentatricopeptide repeat-containing protein At1g31920 Neighboring gene extra-large guanine nucleotide-binding protein 3-like Neighboring gene uncharacterized LOC129311477

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026555336 Unplaced Scaffold Reference ASM2901754v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphomevalonate kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in farnesyl diphosphate biosynthetic process, mevalonate pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in isopentenyl diphosphate biosynthetic process, mevalonate pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphomevalonate kinase, peroxisomal

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029017545.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2901754v1 Primary Assembly

    Genomic

    1. NW_026555336.1 Reference ASM2901754v1 Primary Assembly

      Range
      37481293..37487771
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054952978.1 → XP_054808953.1  phosphomevalonate kinase, peroxisomal isoform X1

    2. XM_054952979.1 → XP_054808954.1  phosphomevalonate kinase, peroxisomal isoform X2

    3. XM_054952981.1 → XP_054808956.1  phosphomevalonate kinase, peroxisomal isoform X3

    Nucleotide Protein
    Heading Accession and Version

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