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    pnpla4 patatin-like phospholipase domain containing 4 [ Ictalurus furcatus (blue catfish) ]

    Gene ID: 128602037, updated on 18-Sep-2024

    Summary

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    Gene symbol
    pnpla4
    Gene description
    patatin-like phospholipase domain containing 4
    See related
    EnsemblRapid:ENSIFRG00005011335
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ictalurus furcatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
    Also known as
    PLPL4
    Orthologs
    human zebrafish all
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    Genomic context

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    See pnpla4 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_03 current Billie_1.0 (GCF_023375685.1) 26 NC_071280.1 (14940877..14948413, complement)

    Chromosome 26 - NC_071280.1Genomic Context describing neighboring genes Neighboring gene anosmin 1a Neighboring gene steroid sulfatase (microsomal), isozyme S Neighboring gene pseudouridine 5'-phosphatase Neighboring gene neuroligin 4 X-linked a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_071280.1 Chromosome 26 Reference Billie_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and characterization of full-length cDNAs in channel catfish (Ictalurus punctatus) and blue catfish (Ictalurus furcatus). Chen F, et al. PLoS One, 2010 Jul 12. PMID 20634964, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables retinyl-palmitate esterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables triacylglycerol lipase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in triglyceride catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lipid droplet IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    patatin-like phospholipase domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_023375685.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Billie_1.0 Primary Assembly

    Genomic

    1. NC_071280.1 Reference Billie_1.0 Primary Assembly

      Range
      14940877..14948413 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_053615559.1 → XP_053471534.1  patatin-like phospholipase domain-containing protein 4 isoform X1

      Related
      ENSIFRP00005029544.1, ENSIFRT00005031530.1

    2. XM_053615562.1 → XP_053471537.1  patatin-like phospholipase domain-containing protein 4 isoform X2

    3. XM_053615560.1 → XP_053471535.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    4. XM_053615561.1 → XP_053471536.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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