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    unm_hu7910 un-named hu7910 [ Carassius gibelio (silver crucian carp) ]

    Gene ID: 127961195, updated on 28-May-2024

    Summary

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    Gene symbol
    unm_hu7910
    Gene description
    un-named hu7910
    See related
    EnsemblRapid:ENSCGBG00020052107
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Carassius gibelio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
    Orthologs
    zebrafish all
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    Genomic context

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    See unm_hu7910 in Genome Data Viewer
    Location:
    chromosome: B7
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2023_02 current carGib1.2-hapl.c (GCF_023724105.1) B7 NC_068402.1 (31804595..31852118, complement)

    Chromosome B7 - NC_068402.1Genomic Context describing neighboring genes Neighboring gene ankyrin 2b, neuronal Neighboring gene uncharacterized LOC127961209 Neighboring gene neutral sphingomyelinase (N-SMase) activation associated factor Neighboring gene gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) Neighboring gene cytochrome P450 7A1 Neighboring gene syndecan binding protein (syntenin)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_068402.1 Chromosome B7 Reference carGib1.2-hapl.c Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptidyl-aspartic acid 3-dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-aspartic acid hydroxylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aspartyl/asparaginyl beta-hydroxylase; uncharacterized abhydrolase domain-containing protein DDB_G0269086

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_023724105.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference carGib1.2-hapl.c Primary Assembly

    Genomic

    1. NC_068402.1 Reference carGib1.2-hapl.c Primary Assembly

      Range
      31804595..31852118 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_052560206.1 → XP_052416166.1  aspartyl/asparaginyl beta-hydroxylase isoform X6

      Related
      ENSCGBP00020068953.1, ENSCGBT00020099772.1

    2. XM_052560205.1 → XP_052416165.1  uncharacterized abhydrolase domain-containing protein DDB_G0269086 isoform X5

      Related
      ENSCGBP00020068128.1, ENSCGBT00020098947.1

    3. XM_052560204.1 → XP_052416164.1  uncharacterized abhydrolase domain-containing protein DDB_G0269086 isoform X4

    4. XM_052560202.1 → XP_052416162.1  uncharacterized abhydrolase domain-containing protein DDB_G0269086 isoform X3

    5. XM_052560199.1 → XP_052416159.1  uncharacterized abhydrolase domain-containing protein DDB_G0269086 isoform X1

    6. XM_052560201.1 → XP_052416161.1  uncharacterized abhydrolase domain-containing protein DDB_G0269086 isoform X2

      Related
      ENSCGBP00020068125.1, ENSCGBT00020098944.1

    7. XM_052560200.1 → XP_052416160.1  uncharacterized abhydrolase domain-containing protein DDB_G0269086 isoform X2

      Related
      ENSCGBP00020068124.1, ENSCGBT00020098943.1
    Nucleotide Protein
    Heading Accession and Version

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