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    tjp2a tight junction protein 2a (zona occludens 2) [ Labeo rohita (rohu) ]

    Gene ID: 127171900, updated on 10-Apr-2024

    Summary

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    Gene symbol
    tjp2a
    Gene description
    tight junction protein 2a (zona occludens 2)
    Locus tag
    H4Q32_022656
    See related
    EnsemblRapid:ENSLROG00010007014
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Labeo rohita
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
    Orthologs
    zebrafish all
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    Genomic context

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    See tjp2a in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 10 NC_066878.1 (20226593..20269760)

    Chromosome 10 - NC_066878.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127171525 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase, type I, beta a Neighboring gene amyloid beta (A4) precursor protein-binding, family A, member 1b Neighboring gene MAM domain containing 2b

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_066878.1 Chromosome 10 Reference IGBB_LRoh.1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell adhesion molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell junction organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment of endothelial intestinal barrier IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of blood-brain barrier permeability IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to cell-cell junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in bicellular tight junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tight junction protein ZO-2a
    Names
    Tight junction protein ZO-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IGBB_LRoh.1.0 Primary Assembly

    Genomic

    1. NC_066878.1 Reference IGBB_LRoh.1.0 Primary Assembly

      Range
      20226593..20269760
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051120835.1 → XP_050976792.1  tight junction protein ZO-2a isoform X3

      Related
      ENSLROP00010011714.1, ENSLROT00010013334.1

    2. XM_051120834.1 → XP_050976791.1  tight junction protein ZO-2a isoform X2

      Related
      ENSLROP00010011652.1, ENSLROT00010013272.1

    3. XM_051120833.1 → XP_050976790.1  tight junction protein ZO-2a isoform X1

      Related
      ENSLROP00010011645.1, ENSLROT00010013265.1
    Nucleotide Protein
    Heading Accession and Version

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