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    lama5 laminin, alpha 5 [ Labeo rohita (rohu) ]

    Gene ID: 127154454, updated on 10-Apr-2024

    Summary

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    Gene symbol
    lama5
    Gene description
    laminin, alpha 5
    Locus tag
    H4Q32_015940
    See related
    EnsemblRapid:ENSLROG00010008025
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Labeo rohita
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Labeoninae; Labeonini; Labeo
    Orthologs
    human zebrafish all
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    Genomic context

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    See lama5 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    69
    Annotation release Status Assembly Chr Location
    RS_2023_02 current IGBB_LRoh.1.0 (GCF_022985175.1) 23 NC_066891.1 (22505877..22580546, complement)

    Chromosome 23 - NC_066891.1Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein-like 2b Neighboring gene ADRM1 26S proteasome ubiquitin receptor Neighboring gene microtubule-associated protein, RP/EB family, member 1b Neighboring gene protein kinase C binding protein 1, like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_066891.1 Chromosome 23 Reference IGBB_LRoh.1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables signaling receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of embryonic development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in basement membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    laminin subunit alpha-5
    Names
    Laminin subunit alpha-5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_022985175.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IGBB_LRoh.1.0 Primary Assembly

    Genomic

    1. NC_066891.1 Reference IGBB_LRoh.1.0 Primary Assembly

      Range
      22505877..22580546 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051095977.1 → XP_050951934.1  laminin subunit alpha-5 isoform X2

      Related
      ENSLROP00010015639.1, ENSLROT00010017549.1

    2. XM_051095975.1 → XP_050951932.1  laminin subunit alpha-5 isoform X1

      Related
      ENSLROP00010015611.1, ENSLROT00010017521.1
    Nucleotide Protein
    Heading Accession and Version

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