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    ACSL1 acyl-CoA synthetase long chain family member 1 [ Sphaerodactylus townsendi ]

    Gene ID: 125439837, updated on 22-Mar-2024

    Summary

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    Gene symbol
    ACSL1
    Gene description
    acyl-CoA synthetase long chain family member 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sphaerodactylus townsendi
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Sphaerodactylidae; Sphaerodactylus
    Orthologs
    human mouse all
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    Genomic context

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    See ACSL1 in Genome Data Viewer
    Location:
    chromosome: LG10
    Exon count:
    23
    Annotation release Status Assembly LG Location
    100 current MPM_Stown_v2.3 (GCF_021028975.2) LG10 NC_059434.1 (30928646..30985754)

    Linkage Group LG10 - NC_059434.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125440365 Neighboring gene helt bHLH transcription factor Neighboring gene uncharacterized LOC125439838 Neighboring gene centromere protein U Neighboring gene primase and DNA directed polymerase Neighboring gene caspase 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_059434.1 Chromosome LG10 Reference MPM_Stown_v2.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables arachidonate-CoA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in long-chain fatty acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in long-chain fatty-acyl-CoA biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in very long-chain fatty acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    long-chain-fatty-acid--CoA ligase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sphaerodactylus townsendi Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MPM_Stown_v2.3

    Genomic

    1. NC_059434.1 Reference MPM_Stown_v2.3

      Range
      30928646..30985754
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_048509114.1 → XP_048365071.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    2. XM_048509115.1 → XP_048365072.1  long-chain-fatty-acid--CoA ligase 1 isoform X2

    3. XM_048509116.1 → XP_048365073.1  long-chain-fatty-acid--CoA ligase 1 isoform X3

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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