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    cacna1g calcium channel, voltage-dependent, T type, alpha 1G subunit [ Megalobrama amblycephala (Wuchang bream) ]

    Gene ID: 125255129, updated on 22-Mar-2024

    Summary

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    Gene symbol
    cacna1g
    Gene description
    calcium channel, voltage-dependent, T type, alpha 1G subunit
    See related
    EnsemblRapid:ENSMAYG00005029984
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Megalobrama amblycephala
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Megalobrama
    Orthologs
    human zebrafish all
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    Genomic context

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    See cacna1g in Genome Data Viewer
    Location:
    chromosome: LG20
    Exon count:
    41
    Annotation release Status Assembly LG Location
    100 current ASM1881202v1 (GCF_018812025.1) LG20 NC_063063.1 (19553309..19788068)

    Linkage Group LG20 - NC_063063.1Genomic Context describing neighboring genes Neighboring gene spermatogenesis associated 20 Neighboring gene uncharacterized LOC125255133 Neighboring gene uncharacterized LOC125255132 Neighboring gene urotensin-2 receptor Neighboring gene urotensin-2 receptor Neighboring gene 2-oxoglutarate and iron dependent oxygenase domain containing 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_063063.1 Chromosome LG20 Reference ASM1881202v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables low voltage-gated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables voltage-gated sodium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion import IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in membrane depolarization during action potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuronal action potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of calcium ion-dependent exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated calcium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated sodium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    voltage-dependent T-type calcium channel subunit alpha-1G

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Megalobrama amblycephala Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1881202v1 Primary Assembly

    Genomic

    1. NC_063063.1 Reference ASM1881202v1 Primary Assembly

      Range
      19553309..19788068
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_048170124.1 → XP_048026081.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X12

    2. XM_048170126.1 → XP_048026083.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X13

    3. XM_048170125.1 → XP_048026082.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X12

    4. XM_048170115.1 → XP_048026072.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X4

      Related
      ENSMAYP00005070571.1, ENSMAYT00005078665.1

    5. XM_048170111.1 → XP_048026068.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X1

    6. XM_048170117.1 → XP_048026074.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X6

    7. XM_048170112.1 → XP_048026069.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X2

    8. XM_048170120.1 → XP_048026077.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X8

    9. XM_048170122.1 → XP_048026079.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X10

      Related
      ENSMAYP00005070813.1, ENSMAYT00005078966.1

    10. XM_048170116.1 → XP_048026073.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X5

      Related
      ENSMAYP00005070448.1, ENSMAYT00005078509.1

    11. XM_048170118.1 → XP_048026075.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X7

    12. XM_048170114.1 → XP_048026071.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X3

    13. XM_048170121.1 → XP_048026078.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X9

    14. XM_048170123.1 → XP_048026080.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X11

      Related
      ENSMAYP00005070708.1, ENSMAYT00005078802.1
    Nucleotide Protein
    Heading Accession and Version

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