U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    sh3rf1 SH3 domain containing ring finger 1 [ Silurus meridionalis ]

    Gene ID: 124401174, updated on 22-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    sh3rf1
    Gene description
    SH3 domain containing ring finger 1
    Locus tag
    HF521_008126
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Silurus meridionalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Siluridae; Silurus
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See sh3rf1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current ASM1480568v1 (GCF_014805685.1) 18 NC_060901.1 (22941127..22987155, complement)

    Chromosome 18 - NC_060901.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124401771 Neighboring gene uncharacterized LOC124401537 Neighboring gene NIMA-related kinase 1 Neighboring gene capping protein, Arp2/3 and myosin-I linker protein 3-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_060901.1 Chromosome 18 Reference ASM1480568v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    E3 ubiquitin-protein ligase SH3RF1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Silurus meridionalis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1480568v1 Primary Assembly

    Genomic

    1. NC_060901.1 Reference ASM1480568v1 Primary Assembly

      Range
      22941127..22987155 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046873223.1 → XP_046729179.1  E3 ubiquitin-protein ligase SH3RF1

      UniProtKB/TrEMBL
      A0A8T0AQN8

    2. XM_046873222.1 → XP_046729178.1  E3 ubiquitin-protein ligase SH3RF1

      UniProtKB/TrEMBL
      A0A8T0AQN8
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.