U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC124041629 kin of IRRE-like protein 1 [ Oncorhynchus gorbuscha (pink salmon) ]

    Gene ID: 124041629, updated on 30-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC124041629
    Gene description
    kin of IRRE-like protein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oncorhynchus gorbuscha
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC124041629 in Genome Data Viewer
    Location:
    chromosome: LG08
    Exon count:
    15
    Annotation release Status Assembly LG Location
    100 current OgorEven_v1.0 (GCF_021184085.1) LG08 NC_060180.1 (38727974..38842952, complement)

    Linkage Group LG08 - NC_060180.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 572-like Neighboring gene uncharacterized LOC124041627 Neighboring gene ATP-sensitive inward rectifier potassium channel 10-like Neighboring gene uncharacterized LOC124041631 Neighboring gene cell adhesion molecule 3-like Neighboring gene transfer RNA arginine (anticodon UCU)

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_060180.1 Chromosome LG08 Reference OgorEven_v1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell adhesion molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell-cell junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    kin of IRRE-like protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference OgorEven_v1.0 Primary Assembly

    Genomic

    1. NC_060180.1 Reference OgorEven_v1.0 Primary Assembly

      Range
      38727974..38842952 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046359427.1 → XP_046215383.1  kin of IRRE-like protein 1 isoform X1

    2. XM_046359428.1 → XP_046215384.1  kin of IRRE-like protein 1 isoform X2

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases