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    Ho Heme oxygenase [ Procambarus clarkii (red swamp crayfish) ]

    Gene ID: 123762297, updated on 30-Oct-2024

    Summary

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    Gene symbol
    Ho
    Gene description
    Heme oxygenase
    See related
    EnsemblRapid:LOC123762297
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Procambarus clarkii
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus
    Orthologs
    fruit fly all
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_10 current FALCON_Pclarkii_2.0 (GCF_040958095.1) 2 NC_091151.1 (48009895..48013908, complement)
    100 previous assembly ASM2042438v2 (GCF_020424385.1) Linkage Group LG33 NC_059603.1 (18815723..18819738)

    Chromosome 2 - NC_091151.1Genomic Context describing neighboring genes Neighboring gene heat shock 70 kDa protein cognate 4 Neighboring gene uncharacterized LOC138365250 Neighboring gene heat shock-related 70 kDa protein 2-like Neighboring gene uncharacterized LOC123762294 Neighboring gene conserved oligomeric Golgi complex subunit 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression of cytoskeletal and molt-related genes is temporally scheduled in the hypodermis of the crayfish Procambarus clarkii during premolt. Tom M, et al. J Exp Biol, 2014 Dec 1. PMID 25278476
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heme oxygenase (decyclizing) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in heme catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in heme oxidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heme oxygenase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_040958095.1-RS_2024_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference FALCON_Pclarkii_2.0 Primary Assembly

    Genomic

    1. NC_091151.1 Reference FALCON_Pclarkii_2.0 Primary Assembly

      Range
      48009895..48013908 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045748728.2 → XP_045604684.1  heme oxygenase 1

      Related
      XP_045604684.1
    Nucleotide Protein
    Heading Accession and Version

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