NEW
Try the new Transcript table
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference O.geoffroyi_Oge1_pat1.0 Primary Assembly
Genomic
-
NC_059326.1 Reference O.geoffroyi_Oge1_pat1.0 Primary Assembly
- Range
-
80619863..80755547
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_045482189.1 → XP_045338145.1 rho guanine nucleotide exchange factor 7 isoform X2
- Conserved Domains (7) summary
-
- cd12061
Location:208 → 261
- SH3_betaPIX; Src Homology 3 domain of beta-Pak Interactive eXchange factor
- PHA03247
Location:605 → 688
- PHA03247; large tegument protein UL36; Provisional
- cd00160
Location:292 → 469
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd01225
Location:500 → 598
- PH_Cool_Pix; Cloned out of library/PAK-interactive exchange factor pleckstrin homology (PH) domain
- pfam16614
Location:654 → 752
- RhoGEF67_u2; Unstructured region two on RhoGEF 6 and 7
- pfam16523
Location:814 → 900
- betaPIX_CC; betaPIX coiled coil
- pfam16615
Location:158 → 204
- RhoGEF67_u1; Unstructured region one on RhoGEF 6 and 7
-
XM_045482296.1 → XP_045338252.1 rho guanine nucleotide exchange factor 7 isoform X13
- Conserved Domains (6) summary
-
- PTZ00121
Location:577 → 712
- PTZ00121; MAEBL; Provisional
- cd12061
Location:95 → 148
- SH3_betaPIX; Src Homology 3 domain of beta-Pak Interactive eXchange factor
- smart00033
Location:21 → 96
- CH; Calponin homology domain
- cd00160
Location:179 → 356
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd01225
Location:387 → 485
- PH_Cool_Pix; Cloned out of library/PAK-interactive exchange factor pleckstrin homology (PH) domain
- pfam16614
Location:541 → 639
- RhoGEF67_u2; Unstructured region two on RhoGEF 6 and 7
-
XM_045482303.1 → XP_045338259.1 rho guanine nucleotide exchange factor 7 isoform X14
-
XM_045482270.1 → XP_045338226.1 rho guanine nucleotide exchange factor 7 isoform X10
- Related
- ENSFCTP00000049193.1, ENSFCTT00000071643.1
- Conserved Domains (6) summary
-
- cd12061
Location:95 → 148
- SH3_betaPIX; Src Homology 3 domain of beta-Pak Interactive eXchange factor
- cd00160
Location:179 → 356
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd01225
Location:387 → 485
- PH_Cool_Pix; Cloned out of library/PAK-interactive exchange factor pleckstrin homology (PH) domain
- pfam16614
Location:541 → 639
- RhoGEF67_u2; Unstructured region two on RhoGEF 6 and 7
- pfam16523
Location:701 → 787
- betaPIX_CC; betaPIX coiled coil
- cl00030
Location:3 → 89
- CH_SF; calponin homology (CH) domain superfamily
-
XM_045482199.1 → XP_045338155.1 rho guanine nucleotide exchange factor 7 isoform X3
- Related
- ENSFCTP00000049117.1, ENSFCTT00000071538.1
- Conserved Domains (7) summary
-
- cd12061
Location:167 → 220
- SH3_betaPIX; Src Homology 3 domain of beta-Pak Interactive eXchange factor
- cd00160
Location:251 → 428
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd01225
Location:459 → 557
- PH_Cool_Pix; Cloned out of library/PAK-interactive exchange factor pleckstrin homology (PH) domain
- pfam16614
Location:613 → 711
- RhoGEF67_u2; Unstructured region two on RhoGEF 6 and 7
- pfam16523
Location:773 → 859
- betaPIX_CC; betaPIX coiled coil
- pfam16615
Location:117 → 163
- RhoGEF67_u1; Unstructured region one on RhoGEF 6 and 7
- cd21266
Location:3 → 115
- CH_betaPIX; calponin homology (CH) domain found in beta-Pak Interactive eXchange factor
-
XM_045482249.1 → XP_045338205.1 rho guanine nucleotide exchange factor 7 isoform X8
- Conserved Domains (7) summary
-
- cd12061
Location:167 → 220
- SH3_betaPIX; Src Homology 3 domain of beta-Pak Interactive eXchange factor
- cd00160
Location:251 → 428
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd01225
Location:459 → 557
- PH_Cool_Pix; Cloned out of library/PAK-interactive exchange factor pleckstrin homology (PH) domain
- pfam16614
Location:613 → 711
- RhoGEF67_u2; Unstructured region two on RhoGEF 6 and 7
- pfam16523
Location:714 → 800
- betaPIX_CC; betaPIX coiled coil
- pfam16615
Location:117 → 163
- RhoGEF67_u1; Unstructured region one on RhoGEF 6 and 7
- cd21266
Location:3 → 115
- CH_betaPIX; calponin homology (CH) domain found in beta-Pak Interactive eXchange factor
-
XM_045482279.1 → XP_045338235.1 rho guanine nucleotide exchange factor 7 isoform X11
- Conserved Domains (7) summary
-
- cd12061
Location:167 → 220
- SH3_betaPIX; Src Homology 3 domain of beta-Pak Interactive eXchange factor
- cd00160
Location:251 → 428
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd01225
Location:459 → 557
- PH_Cool_Pix; Cloned out of library/PAK-interactive exchange factor pleckstrin homology (PH) domain
- pfam16614
Location:613 → 683
- RhoGEF67_u2; Unstructured region two on RhoGEF 6 and 7
- pfam16523
Location:684 → 770
- betaPIX_CC; betaPIX coiled coil
- pfam16615
Location:117 → 163
- RhoGEF67_u1; Unstructured region one on RhoGEF 6 and 7
- cd21266
Location:3 → 115
- CH_betaPIX; calponin homology (CH) domain found in beta-Pak Interactive eXchange factor
-
XM_045482260.1 → XP_045338216.1 rho guanine nucleotide exchange factor 7 isoform X9
- Related
- ENSFCTP00000049411.1, ENSFCTT00000071959.1
-
XM_045482219.1 → XP_045338175.1 rho guanine nucleotide exchange factor 7 isoform X5
- Related
- ENSFCTP00000048795.1, ENSFCTT00000071116.1
-
XM_045482238.1 → XP_045338194.1 rho guanine nucleotide exchange factor 7 isoform X7
- Related
- ENSFCTP00000048927.1, ENSFCTT00000071284.1
-
XM_045482288.1 → XP_045338244.1 rho guanine nucleotide exchange factor 7 isoform X12
-
XM_045482179.1 → XP_045338135.1 rho guanine nucleotide exchange factor 7 isoform X1
- Conserved Domains (5) summary
-
- cd12061
Location:10 → 63
- SH3_betaPIX; Src Homology 3 domain of beta-Pak Interactive eXchange factor
- cd00160
Location:94 → 271
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd01225
Location:302 → 400
- PH_Cool_Pix; Cloned out of library/PAK-interactive exchange factor pleckstrin homology (PH) domain
- pfam16614
Location:456 → 554
- RhoGEF67_u2; Unstructured region two on RhoGEF 6 and 7
- pfam16523
Location:616 → 702
- betaPIX_CC; betaPIX coiled coil
-
XM_045482208.1 → XP_045338164.1 rho guanine nucleotide exchange factor 7 isoform X4
- Conserved Domains (5) summary
-
- cd12061
Location:10 → 63
- SH3_betaPIX; Src Homology 3 domain of beta-Pak Interactive eXchange factor
- cd00160
Location:94 → 271
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd01225
Location:302 → 400
- PH_Cool_Pix; Cloned out of library/PAK-interactive exchange factor pleckstrin homology (PH) domain
- pfam16614
Location:456 → 554
- RhoGEF67_u2; Unstructured region two on RhoGEF 6 and 7
- pfam16523
Location:557 → 643
- betaPIX_CC; betaPIX coiled coil
-
XM_045482334.1 → XP_045338290.1 rho guanine nucleotide exchange factor 7 isoform X1
- Conserved Domains (5) summary
-
- cd12061
Location:10 → 63
- SH3_betaPIX; Src Homology 3 domain of beta-Pak Interactive eXchange factor
- cd00160
Location:94 → 271
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd01225
Location:302 → 400
- PH_Cool_Pix; Cloned out of library/PAK-interactive exchange factor pleckstrin homology (PH) domain
- pfam16614
Location:456 → 554
- RhoGEF67_u2; Unstructured region two on RhoGEF 6 and 7
- pfam16523
Location:616 → 702
- betaPIX_CC; betaPIX coiled coil
-
XM_045482344.1 → XP_045338300.1 rho guanine nucleotide exchange factor 7 isoform X4
- Conserved Domains (5) summary
-
- cd12061
Location:10 → 63
- SH3_betaPIX; Src Homology 3 domain of beta-Pak Interactive eXchange factor
- cd00160
Location:94 → 271
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd01225
Location:302 → 400
- PH_Cool_Pix; Cloned out of library/PAK-interactive exchange factor pleckstrin homology (PH) domain
- pfam16614
Location:456 → 554
- RhoGEF67_u2; Unstructured region two on RhoGEF 6 and 7
- pfam16523
Location:557 → 643
- betaPIX_CC; betaPIX coiled coil
-
XM_045482328.1 → XP_045338284.1 rho guanine nucleotide exchange factor 7 isoform X4
- Conserved Domains (5) summary
-
- cd12061
Location:10 → 63
- SH3_betaPIX; Src Homology 3 domain of beta-Pak Interactive eXchange factor
- cd00160
Location:94 → 271
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd01225
Location:302 → 400
- PH_Cool_Pix; Cloned out of library/PAK-interactive exchange factor pleckstrin homology (PH) domain
- pfam16614
Location:456 → 554
- RhoGEF67_u2; Unstructured region two on RhoGEF 6 and 7
- pfam16523
Location:557 → 643
- betaPIX_CC; betaPIX coiled coil
-
XM_045482321.1 → XP_045338277.1 rho guanine nucleotide exchange factor 7 isoform X1
- Conserved Domains (5) summary
-
- cd12061
Location:10 → 63
- SH3_betaPIX; Src Homology 3 domain of beta-Pak Interactive eXchange factor
- cd00160
Location:94 → 271
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd01225
Location:302 → 400
- PH_Cool_Pix; Cloned out of library/PAK-interactive exchange factor pleckstrin homology (PH) domain
- pfam16614
Location:456 → 554
- RhoGEF67_u2; Unstructured region two on RhoGEF 6 and 7
- pfam16523
Location:616 → 702
- betaPIX_CC; betaPIX coiled coil
-
XM_045482227.1 → XP_045338183.1 rho guanine nucleotide exchange factor 7 isoform X6
- Related
- ENSFCTP00000049496.1, ENSFCTT00000072084.1
- Conserved Domains (7) summary
-
- cd12061
Location:85 → 138
- SH3_betaPIX; Src Homology 3 domain of beta-Pak Interactive eXchange factor
- cd00160
Location:169 → 346
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd01225
Location:377 → 475
- PH_Cool_Pix; Cloned out of library/PAK-interactive exchange factor pleckstrin homology (PH) domain
- pfam16614
Location:531 → 629
- RhoGEF67_u2; Unstructured region two on RhoGEF 6 and 7
- pfam16523
Location:691 → 777
- betaPIX_CC; betaPIX coiled coil
- pfam16615
Location:35 → 81
- RhoGEF67_u1; Unstructured region one on RhoGEF 6 and 7
- cl00030
Location:1 → 33
- CH_SF; calponin homology (CH) domain superfamily
-
XM_045482312.1 → XP_045338268.1 rho guanine nucleotide exchange factor 7 isoform X15