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    ano5a anoctamin 5a [ Siniperca chuatsi (mandarin fish) ]

    Gene ID: 122875387, updated on 22-Mar-2024

    Summary

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    Gene symbol
    ano5a
    Gene description
    anoctamin 5a
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Siniperca chuatsi
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Sinipercidae; Siniperca
    Orthologs
    human zebrafish all
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    Genomic context

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    See ano5a in Genome Data Viewer
    Location:
    chromosome: LG4
    Exon count:
    24
    Annotation release Status Assembly LG Location
    100 current ASM2008510v1 (GCF_020085105.1) LG4 NC_058045.1 (10052838..10071770, complement)

    Linkage Group LG4 - NC_058045.1Genomic Context describing neighboring genes Neighboring gene FA complementation group F Neighboring gene solute carrier family 17 member 6a Neighboring gene P2Y purinoceptor 3-like Neighboring gene anoctamin-9 Neighboring gene single immunoglobulin and toll-interleukin 1 receptor (TIR) domain

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_058045.1 Chromosome LG4 Reference ASM2008510v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chloride channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chloride transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    anoctamin-5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Siniperca chuatsi Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2008510v1 Primary Assembly

    Genomic

    1. NC_058045.1 Reference ASM2008510v1 Primary Assembly

      Range
      10052838..10071770 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044194410.1 → XP_044050345.1  anoctamin-5 isoform X1

    2. XM_044194411.1 → XP_044050346.1  anoctamin-5 isoform X2

    3. XM_044194412.1 → XP_044050347.1  anoctamin-5 isoform X3

    4. XM_044194413.1 → XP_044050348.1  anoctamin-5 isoform X4

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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