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    LOC122851580 prolyl 3-hydroxylase 2-like [ Aphidius gifuensis ]

    Gene ID: 122851580, updated on 1-Oct-2024

    Summary

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    Gene symbol
    LOC122851580
    Gene description
    prolyl 3-hydroxylase 2-like
    Locus tag
    HCN44_011456
    See related
    EnsemblRapid:LOC122851580
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Aphidius gifuensis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Aphidiinae; Aphidius
    Orthologs
    honey bee all
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    Genomic context

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    See LOC122851580 in Genome Data Viewer
    Location:
    chromosome: LG3
    Exon count:
    10
    Annotation release Status Assembly LG Location
    100 current ASM1490517v1 (GCF_014905175.1) LG3 NC_057790.1 (4391918..4396337, complement)

    Linkage Group LG3 - NC_057790.1Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 6 homolog Neighboring gene F-BAR domain only protein 2 Neighboring gene multiple inositol polyphosphate phosphatase 1-like Neighboring gene RNA polymerase III subunit E Neighboring gene dynein light chain Tctex-type 5-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057790.1 Chromosome LG3 Reference ASM1490517v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-ascorbic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in collagen metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    prolyl 3-hydroxylase 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Aphidius gifuensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1490517v1 Primary Assembly

    Genomic

    1. NC_057790.1 Reference ASM1490517v1 Primary Assembly

      Range
      4391918..4396337 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044150909.1 → XP_044006844.1  prolyl 3-hydroxylase 2-like

      UniProtKB/TrEMBL
      A0A835CSD0
      Related
      XP_044006844.1, XM_044150909.1
      Conserved Domains (1) summary
      smart00702
      Location:490 → 688
      P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases