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    LOC122636257 pyridoxine/pyridoxamine 5'-phosphate oxidase-like [ Vespula pensylvanica (western yellowjacket) ]

    Gene ID: 122636257, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC122636257
    Gene description
    pyridoxine/pyridoxamine 5'-phosphate oxidase-like
    Locus tag
    H0235_017060
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vespula pensylvanica
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Vespidae; Vespinae; Vespula
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    Genomic context

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    See LOC122636257 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current ASM1446617v1 (GCF_014466175.1) 21 NC_057705.1 (3631645..3634399, complement)

    Chromosome 21 - NC_057705.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122636232 Neighboring gene L-lactate dehydrogenase-like Neighboring gene uncharacterized LOC122636231 Neighboring gene uncharacterized LOC122636364

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057705.1 Chromosome 21 Reference ASM1446617v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables FMN binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxamine phosphate oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in pyridoxal phosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pyridoxine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pyridoxine/pyridoxamine 5'-phosphate oxidase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Vespula pensylvanica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1446617v1

    Genomic

    1. NC_057705.1 Reference ASM1446617v1

      Range
      3631645..3634399 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043827281.1 → XP_043683216.1  pyridoxine/pyridoxamine 5'-phosphate oxidase-like

      UniProtKB/TrEMBL
      A0A834JUL6
      Conserved Domains (1) summary
      TIGR00558
      Location:36 → 239
      pdxH; pyridoxamine-phosphate oxidase

    RNA

    1. XR_006328894.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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