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    LOC122256524 cobalamin trafficking protein CblD-like [ Penaeus japonicus ]

    Gene ID: 122256524, updated on 1-Jul-2024

    Summary

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    Gene symbol
    LOC122256524
    Gene description
    cobalamin trafficking protein CblD-like
    See related
    EnsemblRapid:LOC122256524
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Penaeus japonicus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Penaeus
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC122256524 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current Mj_TUMSAT_v1.0 (GCF_017312705.1) Unplaced Scaffold NW_025031457.1 (67438..76731, complement)

    NW_025031457.1Genomic Context describing neighboring genes Neighboring gene regulator of microtubule dynamics protein 1-like Neighboring gene uncharacterized LOC122256522 Neighboring gene GDP-L-fucose synthase-like protein Neighboring gene reticulophagy regulator 3-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_025031457 Unplaced Scaffold Reference Mj_TUMSAT_v1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cobalamin metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cobalamin trafficking protein CblD-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Penaeus japonicus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mj_TUMSAT_v1.0 Primary Assembly

    Genomic

    1. NW_025031457.1 Reference Mj_TUMSAT_v1.0 Primary Assembly

      Range
      67438..76731 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043021286.1 → XP_042877220.1  cobalamin trafficking protein CblD-like isoform X2

      Related
      XP_042877220.1, XM_043021286.1

    2. XM_043021285.1 → XP_042877219.1  cobalamin trafficking protein CblD-like isoform X1

      Related
      XP_042877219.1, XM_043021285.1
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases