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    LOC121299985 crk-like protein [ Polyodon spathula (Mississippi paddlefish) ]

    Gene ID: 121299985, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC121299985
    Gene description
    crk-like protein
    See related
    EnsemblRapid:ENSPAHG00005031668
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Polyodon spathula
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Polyodontidae; Polyodon
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    Genomic context

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    See LOC121299985 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current ASM1765450v1 (GCF_017654505.1) 25 NC_054558.1 (18165495..18172385, complement)

    Chromosome 25 - NC_054558.1Genomic Context describing neighboring genes Neighboring gene calcineurin-binding protein cabin-1-like Neighboring gene T-box-containing protein TBX6L-like Neighboring gene kelch-like protein 22 Neighboring gene mediator of RNA polymerase II transcription subunit 15-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_054558.1 Chromosome 25 Reference ASM1765450v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of ERK1 and ERK2 cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    crk-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Polyodon spathula Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1765450v1 Primary Assembly

    Genomic

    1. NC_054558.1 Reference ASM1765450v1 Primary Assembly

      Range
      18165495..18172385 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041228292.1 → XP_041084226.1  crk-like protein

      Related
      ENSPAHP00005042341.1, ENSPAHT00005047229.1
      Conserved Domains (3) summary
      cd09926
      Location:6 → 106
      SH2_CRK_like; Src homology 2 domain found in cancer-related signaling adaptor protein CRK
      cd11758
      Location:126 → 180
      SH3_CRK_N; N-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins
      cl17036
      Location:235 → 291
      SH3; Src Homology 3 domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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